Commit 62f69885 authored by cc215's avatar cc215 💬
Browse files

update readme

parent d4d9021c
......@@ -136,8 +136,8 @@ e.g.
- this script will perform the following steps:
- 1. load images from disk 'test_data/' and load model from `.checkpoints/UNet_LVSA_Adv_Compose_(epochs=20).pth`
- 2. perform image resampling to have a uniform pixel spacing 1.25 x 1.25 mm
- 3. central crop images to 192x192
- 4. intensity normalizaton to [0,1]
- 3. central crop images to the size of 256x256
- 4. standard intensity normalizaton so that intensity distribution of each slice has zero mean, 1 std.
- 5. predict the segmentation map
- 6. recover the image size and resample the prediction back to its original image space.
- 7. save the predicted segmentation maps for `test_data/patient_id/LVSA/LVSA_img_{}.nii.gz` to `test_results/LVSA/patient_id/Adv_Compose_pred_ED.nii.gz`
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment